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HIV/AIDS Drug Screening

Protease inhibitors identified by chemical taxonomy-based search engine

Published in AIDS Weekly, August 7th, 2006

A chemical taxonomy-based search engine is used to identify antiretroviral agents.

According to recent research from the United States, "A novel technique to annotate, query, and analyze chemical compounds has been developed and is illustrated by using the inhibitor data on HIV protease-inhibitor complexes. In this method, all chemical compounds are annotated in terms of standard chemical structural fragments.

"These standard fragments are defined by using criteria, such as chemical classification; structural, chemical, or functional groups; and commercial, scientific or common names, or synonyms. These fragments are then organized into a data tree...

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