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Genomics and Genetics Weekly

Susan Hasty, Publisher

Table of Contents . . . November 12th, 2004

Non-Subscriber - Summaries Only

Related Areas: Other Issues in Genomics and Genetics Weekly | Other Publications

Cell Biology - DNA and histone synthesis are coordinated under normal and adverse conditions

DNA Research - Effect of biotin on T-cell CYP1B1 expression characterized

Gene Mapping - Marker studies grow closer to identifying a gene for the MRX84 disorder

Gene Research - Gene variants associated with CV disease show no relation to atherosclerosis

Genomics - Klhl may have a role in the organization of striated muscle cytoarchitecture

Acute Renal Failure - Physiologic and transcriptional causes elucidated

Adenovirus Detection - Novel method detects and types adenoviruses directly from conjunctival scrapings

Aging - Overexpression of fatty acid-binding protein related to skin aging

Alcoholism - Study reports genetic susceptibility to alcoholism in NMDA receptor

Alzheimer Disease - Biotech company announces results of Alzheimer study

Alzheimer Disease - Current status of Alzheimer disease genetics reviewed

Antibiotics -  S. warneri ISK-1 gene cluster characterized

Antimicrobial Resistance - Integrons play minor roles in antibiotic resistance in surgical units

Antimicrobials - Baylor, biopharma to test an agent against deadly resistant bacteria

Antiviral Therapy - Adefovir curtails lamivudine-resistant mutants in woodchucks with hepatitis

Bacteriology - Three SNP genotypes in ALDH2 detected using bacterial magnetic particles

Brain Ischemia - Acute and delayed ischemia-induced gene expression characterized in rats

Breast Cancer - Loss of PTEN expression infrequent

Breast Cancer - Ninety-seven grants awarded to breast cancer scientists and researchers

Breast Cancer - PTEN loss in invasive ductal carcinoma of the breast predicts poor survival

Breast Cancer - Promoter methylation of PTEN gene is common molecular change in breast cancer

Breast Cancer - U.S. NIH study seeks 50,000 sisters of women with breast cancer

Business & Finance - Biotechnology company announces commitment for $13 million equity financing

Business & Finance - Gene-identification company provides 2004 update

Business & Finance - Gene-transfer company moves to Nasdaq

Business Update - Diagnostics company joins personalized medicine coalition

Campylobacter - Thermophilic Campylobacter detected by real-time PCR hybridization probe assay

Cancer Therapy - Epigenome manipulation turns off as many genes as it turns on

Cancer Therapy - Imatinib sensitivity predicted by testing Wilms tumor gene expression

Cancer Therapy - Novel transplatinum drug ATZ interferes with topoisomerase I in cancer cells

Cancer Therapy - PTEN deficiency predicts trastuzumab resistance in breast cancer patients

Cardiology - Atrial and brain natriuretic peptide levels rise in the ischemic myocardium

Cardiology - Established methods, new imaging techniques used to study conotruncal defects

Cardiomyocytes - PCM.1 binds primary cardiomyocytes 180 times better than control phage

Cardioprotection - Trans-resveratrol suppressed aortic atherosclerosis and reduced thrombosis

Cell Biology - Yeast centrin Cdc31 linked to nuclear mRNA export machinery

Cerebrovascular Atherosclerosis -  Chlamydia pneumoniae not involved in severe cerebrovascular atherosclerosis

Cerebrovascular Disease - Global ischemia produces gene clusters that can index stress severity

Chondrogenesis - ZNF470 may help regulate chondrogenesis-specific gene expression

Chronic Liver Disease - Hepatitis C virus NS5A and nuclear factor-kappa B generate liver injury

Chronic Myeloid Leukemia - BCR-ABL transcripts early predictors for hematological relapse in CML after HSCT

Clinical Practice - Full participation minimizes parallelisms and gaps between research and care

Collaborations - Althea enters alliance to expedite genomic biomarker identification, application

Collaborations - GNI enters R&D drug-discovery collaboration

Collaborations - Partnership to allow hospital and university system to share resources

Collaborations - SAIS and CombiMatrix to jointly develop biothreat identification microarrays

Coronary Artery Bypass Grafting - Effects of enalapril, losartan, and/or IL-6 gene mutations determined

Cushing Syndrome - GIPR regulatory genes are unlikely to underlie GIP-dependent Cushing syndrome

Cystic Fibrosis - Foundation urges states to include CF screening for newborns in test panels

Cystic Fibrosis - Positive phase II results reported for cystic fibrosis drug

Cytokines - Single nucleotide polymorphisms in cytokine genes genotyped

DNA - Photo film company enters nucleic acid market

DNA Research - Incubation temperatures facilitate DNA hairpin structure reopening

DNA Research - Novel reaction discovery technique developed

Dermatology - Multiple loci are responsible for causing Marie Unna hereditary hypotrichosis

Dermatology - Stat3 is required for the onset of epithelial carcinogenesis

Diabetes Complications - Gene linked to greater risk of heart disease in type 2 diabetes

Diabetes Genomics and Genetics - Lymphocyte-specific protein tyrosine kinase gene and diabetes analyzed

Diabetes Genomics and Genetics - UCP2 gene promoter polymorphism modulates lipids in diabetic patients

Diabetes Pathogenesis - Progression to islet destruction in transgenic model reviewed

Diabetes Risk Factor - HLA class I molecules on T cells overexpressed in type 1 diabetes

Diabetic Nephropathy - Human GFPT1 gene associated with diabetic nephropathy

Diagnostics - Antitumor response visualized by fluorescent molecular tomography

Diagnostics - Bioassays company announces U.S. Army contract, new kinase Activity Assays

Diagnostics - Prevalence of Porphyromonas gingivalis associated with periodontal status

Diagnostics - Surfactin-producing Bacillus subtilis rapidly detected and characterized by PCR

Diagnostics - Tabletop DNA test laboratory developed

Diet & Nutrition - Excess dietary omega 6 speeds breast cancer by altering gene activity

Distribution Agreement - Cold Spring Biotech Corp. to distribute avadis in Taiwan

Down Syndrome - Researchers review inhibin A in second-trimester screening

Drug Development - NIH agency awards $6 million contract for preclinical studies on drug addiction

Drug Resistance - Oligonucleotide chips detect mutants in untreated patients with hepatitis B

Embryology - Embryotrophic effect of PAF mediated via functional receptors in SCNT embryos

Endocrinology - Real-time PCR simultaneously analyzes numerous steroidogenic enzyme expressions

Endocrinology - Study reports positive correlation between allopregnanolone and PBR density

Environmental Health - Molecular effects of different types of estrogen clarified

Finance - $9 Million funding round closed

Finance - Bioinformatics company secures EUR 2.25M growth financing

Finance - Biotech listed as one of Maryland's fastest-growing technology companies

Finance - Biotech reports third quarter revenue increase of 64%

Finance - Encore offers stock option grants to employees of acquired company

Finance - Photodynamic therapy company receives $15 million line of credit

Finance - Regeneration-focused company to raise $13.2M in registered direct offering

Gene Expression - Transgene expression endures under the right conditions

Gene Expression - Updated E. coli and Yeast whole genome arrays launched

Gene Linkage - Linkage studies refine the association of MAPT and Parkinson disease

Gene Mutation - Mutation hotspots in p53 gene depend on tumor type and cell growth conditions

Gene Research - Somatic mutations in genes of cardiac cells provide a novel mechanism of disease

Generalized Anxiety Disorder - New data suggest Cipralex is superior to Paxil for GAD

Genetic Disorders - Bed partner ratings provide added information in sleep disordered breathing

Genetics - Close parallel is seen between D. melanogaster and mammalian mesoderm

Genomics - Companies team up to provide researchers human genomic DNA for gene regulation

Genomics - Genomics company and GlaxoSmithKline sign agreement for genome scanning project

Genomics - Genomics company taps Wilson Sonsini Goodrich & Rosati as law firm

Genomics and Genetics - Chromatin architecture of human genome characterized

Genomics and Genetics - Imaging programs developed for E. coli microarray studies

Genomics and Genetics - Utility of BAC arrays reviewed

Genomics and Genetics - Utility of microarrays in cytogenetic analysis reviewed

Geriatrics - Alterations in MCP-1 may influence the pathology of Alzheimer disease

Geriatrics - Genes may have a greater influence on longevity as one grows older

Gingivitis - Long-term cyclosporin A exposure suppresses cathepsin-B/-L in gingival cells

Gum Disease - Laser gum-disease protocol gains FDA clearance

HIV/AIDS Diagnostics - Cobas Amplicor HIV Monitor 1.5 test modified to measure proviral DNA in PBMCs

HIV/AIDS Drug Resistance - Multidrug-resistance in primary HIV infection leads to superinfection

HIV/AIDS Drug Resistance - Primary drug resistance persists in recently HIV-1 infected adults

HIV/AIDS Pathogenesis - Inducible iNOS CCTTT-repeat polymorphism not associated with HIV pathogenesis

HIV/AIDS Research - Novel CCR5 mutation affects HIV co-receptor immunoreactivity/fusogenic property

HIV/AIDS Research - Structure of HIV-1 genomic RNA in gp120 gene determines a recombination hot spot

HIV/AIDS Research - Tat expression influence on x(c)- independent of cellular status of glutathione

HIV/AIDS Research - Two binding modes for HIV-1 reverse transcriptase suggested

HIV/AIDS Therapy - Imperatorin inhibits HIV-1 replication through Sp1-dependent pathway

HIV/AIDS Therapy - L-chicoric acid inhibits HIV-1 integration

HIV/AIDS Therapy - Statins inhibit HIV-1 infection by down-regulating Rho activity

HIV/AIDS-Related Dementia - Sphingolipid and sterol metabolism in HIV dementia dysregulated by ApoE4

Hematology - Iron overload characterized in beta 2-microglobulin-deficient mice

Hematology - Platelet mRNA profiles characterized

Herpesvirus - DNA vaccine trial initiated for treatment of herpes simplex type 2

Human Genome - Commonly used sequencing technique may not be as accurate as believed

Human Genome - NIH grant for ultra-miniaturized technology to sequence whole human genomes

Human Genome - New grants will aid quest to find all functional elements in human DNA

Hypertension - All dihydropyridine CCBs licensed for once-daily administration are equivalent

Idiopathic Pneumonia Syndrome - Pulmonary histopathology after BMT accompanied by endothelial cell apoptosis

Immunology - CD2-CD48 interactions promote T-cell activation by stabilizing cytokine mRNA

Immunology - Folate deficiency inhibits CD8+ cell proliferation

Immunology - Lag-3 gene dampens immune responses by controlling regulatory T-cell function

Immunology - Retroviral-mediated gene transfer corrects B-cell development in murine models

Immunology - Zebrafish may offer powerful new tool for studying innate immunity

Infectious Disease - New phase II study of hepatitis treatment underway

Infectious Disease - Studies show promise for respiratory disease vaccine

Ischemia - Report offers points for consideration when instigating aldosterone therapy

Ischemic Stroke - Kozak polymorphism presents a risk for ischemic cerebrovascular events

Joubert Syndrome - Gene for Joubert syndrome with excessive brain folds discovered

Licensing Agreement - Genzyme gets license for human genetic testing applications

Lipid Studies - Review describes advances in understanding HDL metabolism

Lipoprotein - Gene-diet interactions must be considered in management of metabolic syndrome

Liver Cancer - High telomerase is a prognostic indicator of poor outcome in hepatoblastoma

Liver Disease - Liver biopsy is indicated for patients with chronically high enzyme levels

Lung Cancer - Altered 14-3-3sigma/TEF1delta gene expression involved in lung carcinogenesis

Lung Cancer - Never-smokers with lung cancer may have a unique disease

Lymphedema - Abnormal cellular interactions lay the foundation for lymphedema-distichiasis

Lysosomal Storage Disease - Genetically modified bone marrow treats mucopolysaccharidosis IIIB models

Lysosomal Storage Disease - Sulfamidase injections delay neuropathology in mucopolysaccharidosis models

Mammography - Fischer Imaging announces mammography agreement

Mantle Cell Lymphoma - Secondary genomic alterations in MCL identified

Mast Cells - Mast cell phenotype induction regulated by several independent genes

Medical Devices - Automated diagnostic tool for evaluating micro circulatory perfusion approved

Medical Devices - Utility of tissue microarrays reviewed

Mergers & Acquisitions - Cell therapies company acquires Opexa Pharmaceuticals, Inc.

Mergers & Acquisitions - Imaging device company acquires magnet producer Magnex Scientific Ltd.

Mergers & Acquisitions - Infectio Diagnostic announces plans to merge

Mergers and Acquisitions - Food safety company acquires German distributor

Metabolic Syndrome - Genetic variation in BEACON influences metabolic syndrome phenotypes

Metastatic Melanoma - CR011 advances as potential treatment for metastatic melanoma

Mouse Genome - Mice carry disposable DNA

Multiple Sclerosis - MS patients on COPAXONE therapy for 10 years showed less disability progression

Multiple Sclerosis - Pharma company reports completion of animal model of multiple sclerosis

Muscle Wasting - Mechanism discovered for muscle wasting seen in diabetes, AIDS, other diseases

Mycobacteria - Phenanthrene degradation pathway in Mycobacterium vanbaalenii found

Natural Products - Biosynthetic pathway and gene cluster of curacin A analyzed

Neurodegeneration - Human-specific loci contribute to the risk for neurodegenerative diseases

Neurogenesis - Sox2 deficiency causes neurodegeneration and impaired neurogenesis

Neurology - Pain and inflammation data show overproduction of glutamate may stimulate pain

Neurology - Results of betaseron treatment in patients with multiple sclerosis announced

Neuroscience - In vivo plasmid DNA transfer identifies neurone-specific gene promoters

Neuroscience - Region-specific transcription factor genes identified in mouse brain

Neuroscience - Regulatory role of Brn3a in developing sensory ganglia determined

Nipah Virus Detection - Real-time PCR used for rapid and specific quantitation of Nipah virus

Non-Small Cell Lung Cancer - Epidermal growth factor receptor is not associated with lung cancer survival

Norovirus - Chimeric genomes demonstrated in the Norovirus genus

Obesity - New obesity gene discovered

Obesity - New study shows weight loss surgery improves obesity-related conditions

Obesity Pathogenesis - Mutations in serotonin receptor not linked to early-onset human obesity

Obstetrics - Researchers look at the genetic basis of familial recurrent hydatidiform mole

Oncogenes - X-linked cancer gene: One-hit hypothesis proposed

Oncogenesis - Damage sites show how base excision repair fails after radiation-induced injury

Oncology - Preclinical results announced for multiple myeloma treatment

Ophthalmology - Cell death regulation company announces study published in journal

Pain Research - Company reports inconclusive results from acute migraine study

Parvovirus - Roche LightCycler assay sensitive for quantitatation of parvovirus B19 DNA

Parvovirus Infection - Long-term parvovirus B19 viremia associated with pure RBC aplasia after BMT

Patents - Biotech company says patent review of embryonic kidney-based therapies favorable

Patents - Enzo Biochem announces settlement agreement

Patents - Patent granted for discovery and evolution of proteins from the environment

Personnel - Cellular therapy company names VP global marketing and communications

Personnel - DNA security company names Karin Klemm as COO

Personnel - Edward Penhoet, PhD, steps down from Macugen-maker board

Personnel - Molecular diagnostics company appoints regulatory, quality assurance director

Predictive Toxicology - NIH grant to fund development of phenotype microarray technology

Product Licensing - Dynogen licenses compounds for genitourinary and gastrointestinal disorders

Prostate Cancer - U.S. Senate urges doctors to inform prostate cancer patients of all treatments

Prostate Stem Cells - CD133 is a novel marker for human prostatic epithelial stem cells

Pulmonary Medicine - Interleukins mediate FIZZ1 and the advent of bleomycin-induced lung fibrosis

Renal Cell Carcinoma - Renal cell carcinomas in young patients have a unique genetic background

Renal Disease - Guidelines recommend controlling serum phosphorus and calcium-phosphorus product

Respiratory Virus - RSV-A-induced bronchiolitis is more severe than RSV-B in infants

Rhabdomyosarcoma - Mice engineered with condition mimicking deadly muscle cancer

Rheumatology - The interleukin 1 gene cluster is involved in ankylosing spondylitis

Schistosomiasis - Immunopathogenesis of schistosomiasis reviewed

Schizophrenia - Temporal cortex genes with altered expression identified

Sjogren Syndrome - Autoimmune disease may be associated with estrogen deficiency

Sjogren Syndrome - Gene-altered mouse is model for rare autoimmune syndrome

Spinal Cord Injury - United Spinal Association support becomes accessible for all

Statistical Analysis - Multivariate statistical methods effective for phytopathological research

Stem Cell Research - Researchers use modified blood stem cells to search for blood disease treatments

Stem Cell Research - Selective amplifier genes boost the utility of genetically modified cells

Stem Cell Transplantation - Mesenchymal SCT into unconditioned recipients avoids drug/radiation therapy

Stem Cells - New study shows most Americans support embryonic stem cell research

Trichomoniasis - Trichomoniasis outbreak occurred in a woodpigeon wintering roost

Tuberculosis - Mutations in isoniazid-resistant M. tuberculosis characterized

Tuberculosis Vaccine -  M. tuberculosis genotypes cause wide range of immune responses

Type 1 Diabetes - Clearance given to initiate clinical trial for treatment for type 1 diabetes

Uterine Cancer - SFRP4 may be tumor suppressor protein

Vaccine Development - European patent awarded for nicotine addiction vaccine

Vaccine Development - New agreement includes tuberculosis subunit vaccine development

Virology - Economically important viruses detected in boar semen by real-time PCR

Virology - Viral clearance mechanisms differ between hepatitis B virus genotypes A and D

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