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Biochemistry

Research on biochemistry detailed by scientists at University of California

Published in Genomics and Genetics Weekly, November 10th, 2006

New research, "Multiple levels of affinity-dependent DNA discrimination in Cre-LoxP recombination," is the subject of a report. "Cre recombinase residue Arg259 mediates a canonical bidentate hydrogen-bonded contact with Gua27 of its LoxP DNA substrate. Substituting Cyt8-Gua27 with the three other basepairs, to give LoxAT, LoxTA, and LoxGC, reduced Cre-mediated recombination in vitro, with the preference order of Gua27 >Ade27 approximately Thy27 >>Cyt27," scientists writing in the journal Biochemistry report.

"While LoxAT and LoxTA exhibited 2.5-fold reduced affinity and 2.5-5-fold slower reaction rates, LoxGC was a barely functional substrate. Its...

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