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Proteomics Weekly

Susan Hasty, Publisher

Table of Contents . . . September 1st, 2003

Non-Subscriber - Summaries Only

Related Areas: Other Issues in Proteomics Weekly | Other Publications

Diagnostics - Faster method for creating antibodies in mice discovered

Mutagenesis - Baculovirus expression vector system allows mutant actin protein studies

Breast Cancer - Systemic redundancies may mask the effects of PAI-1 on cancer inactivation

Helicobacter Pylori - Mechanisms of action of Helicobacter pylori virulence factors studied

Herpesvirus - Herpes simplex virus VP16-induced complex investigated

Physiology - Findings in frog oocytes may help study of chromosomes

Allergic Rhinitis - Mast cell product-antagonizing is short-term treatment, long-term solutions needed

Allergic Rhinitis - Rhinitis immunotherapy using specific subcutaneous allergen is better than drugs

Allergies - Latex allergy may create cross-reactive fruit allergies; kiwi is highest risk

Alzheimer Disease - Regulation of glucose by HIF-1 protects neurons from amyloid beta peptide

Anorexia Nervosa - Genes showing differential expression in anorexia mutant mouse identified

Antibacterial Function - Immature dendritic cells have a receptor for human mannan-binding lectin

Antibiotic Research - Resistance may occur in bacteria if innate antibiotic proteins are used

Antibiotics - N- and C-terminal modifications of negamycin affect antibacterial activity

Antifungal Research - Gallerimycin, a moth-derived antifungal peptide, isn't active against yeast

Antimetastatic Action - TSLC1 gene in human lung cancer is probably a cell adhesion molecule

Asthma - Airway epithelium is in constant repair; allergens create cyclic Th2 response

Asthma - Study of glucocorticoid-receptor interactions may lead to new anti-asthma agents

Autoimmune Disease - Autoreactive B lymphocytes may be removable by recombinant fusion proteins

Autoimmune Disease - Some MG seronegative patients may be MuSK antibody positive

Autoimmune Disease - Systemic lupus erythematosus is more prevalent than was previously thought

Autoimmune Disease - Targeted DNA vaccine may reverse disease

B Cell Function - Efficient Vav3 translocation to B cell membrane rafts requires Grb2 and BLNK

Bacteriology - Proteinases secreted by Bacillus intermedius during sporulation studied

Bee Venom - Breast cancer, metastasis, growth reduced with i.v. bee venom therapy in murine model

Biliary Cirrhosis - Symptoms, cirrhosis disease progression are known; cause and cure remain elusive

Biomarkers - New screening for CAR reveals transfection efficiency in cancer cells

Bone Marrow Transplant - Antithymocyte globulin lowers GVHD, worsens T-cell deficiency

Brain Cancer - Welsh study set to accelerate search for new treatment

Cancer Metastasis - Prostate cancer invasion is influenced indirectly by TGF beta1 signals

Cancer Vaccine - Antibody fragments fused to IL-12 and to TNF-alpha exert anti-tumor effect

Cardiology - Exogenous SERCA gene expression depends on CAR levels in cardiac myocytes

Cardiovascular Disease -  GATA4 mutation linked to congenital heart defects

Cell Biology - Scientists create new strain of yeast with 21-amino acid genetic code

Cervical Cancer - Papillomavirus E7 protein blocks pCAF's acetyltransferase, a p53 coactivator

Clear Cell Carcinoma - Three immunohistochemical stains help distinguish clear cell cancer as ovarian or renal

Coagulation - Gln 192 from blood coagulation factor Xa plays key role in function

Cognition - Amyloid-beta peptide impairs short-term but not long-term memory in rats

Cytokine Control - Protein inhibitor of activated STAT3 and androgen receptor compete for STAT3

Cytomegalovirus - Host cell binding prevented for cytomegalovirus coated with AD-2 antibody

DNA Damage Response - Human Spy1 promotes survival of mammalian cells following DNA damage

Dendritic Cell Function - Immature dendritic cells are largely unaffected by apoptotic T cells

Dermatology - Alpha-3-beta-1-integrin regulates hair follicle morphogenesis

Dermatology - EGF receptor may play critical role in suppressing keratinocyte inflammation

Diabetes Complications - Vascular endothelial growth factor is fundamental to diabetic retinopathy

Diagnostic Markers - Trio of AFP, PIVKAII, GGTII increases accuracy of liver cancer diagnosis

Diagnostics - Pediatric Lyme arthritis can be diagnosed using a recombinant IR6 assay

Diarrhea - Intestinal polypeptide antagonists considered as antidiarrhea agents

Drug Design - Drugs must target particular compartment where protein they act upon is located

Endometrial Cell Marker - Cold-inducible RNA-binding protein is downregulated in endometrial carcinoma

Epstein Barr Virus - Inflammatory pseudotumor due to clonal EBV-infected cells can occur in spleen

Escherichia Coli - The StcE gene was probably acquired by E. coli O157:H7 via plasmid

Evolution - An MHC-like region of 19 genes is conserved between humans and fruit flies

Evolutionary Genomics - Pioneering study compares 13 vertebrate genomes

Expression Vectors - Simpler means for making adenoviral cDNA expression libraries have been found

Fish Immunomodulator - Shark cartilage has proteoglycans that stimulate macrophage and B, not T cells

Food Allergy - Recent recommendations for food allergen avoidance in children are reconciled

Food-borne Disease - All Vibrio vulnificus isolates from market oysters are virulent

Gastroenterology - Organelles of Giardia lamblia trophozoite contain cathepsin C activity

Gene Delivery - The new nonviral GE7 vector system takes advantage of overexpressed receptors

Gene Probes - Spotted long oligonucleotide arrays allow for larger scale gene analysis

Gene Transfer - Adenoviral fiber knob modifications overcome refractory transgene expression

Genomics and Genetics - Human autosomal nonsyndromic male infertility gene, CATSPER2, identified

Geriatrics - Proteins that signal amyloid changes in Alzheimer disease are found in PEX

Glioma -  SLIT2 may be glioma tumor suppressor gene

HIV/AIDS - Kappa-opioid, prostanoid EP3 receptors mediate HIV gp120-induced allodynia

HIV/AIDS Neurotoxicity - Neuronal heat shock defenses not activated by HIV gp120

HIV/AIDS Opportunistic Infection - Substance P expression linked to diarrhea severity during cryptosporidiosis

HIV/AIDS Pathogenesis - Downregulation of cell surface CD4 needed for efficient HIV replication

HIV/AIDS Pathogenesis - No direct interaction between Sp1 and HIV Tat proteins

HIV/AIDS Therapy - Proflavine disrupts HIV Rev protein activity

Helicobacter Pylori -  VirB8 homologue essential to secretion system of H. pylori analyzed

Helper T Cells - Inducible costimulator ICOS is involved in T cell activation, IL-4 production

Hematology - Factor VII gene intronic mutation in a lethal factor VII deficiency studied

Hepatology -  PHKA2 gene analysis useful for X-linked liver glycogenosis diagnosis

Herpes Simplex Virus - The HSV ICP8 DNA-binding protein becomes altered upon viral replication setup

Hippocampal - Poly(ADP-ribose) polymerase reduction occurs during stress-related cell death

Histamine Receptor Function - Histamine receptors can bind many molecules, resulting in diverse actions

Hypertension Risk Factor - Activation of central baroreceptor pathway sustained in hypertension

Immune Evasion -  Peptostreptococcus magnus protein L has immunoglobulin binding domains

Immunology -  Hoxa5 gene loss linked to transient setback in murine thyroid development

Immunology - Shark cartilage protein stimulates antitumor immunity in murine models

Infection Susceptibility - Mannose-binding lectin quantity, thus infection resistance, may be genetic

Inflammatory Immunoglobulin - Triggering receptor on myeloid cells can cause sepsis, acute inflammation

Insect Sting Allergy - Insect sting anaphylaxis appears related to mastocytosis, urticaria pigmentosa

Interlukin Expression - IFN-alpha induces binding of IRF-1 and Stat3 to the IL-10 promoter

Intravenous Immunoglobulin - IVIG is immunomodulatory, anti-inflammatory, and provides passive immunization

Kidney Transplant - The use of IVIG in renal transplant may help suppress panel reactive antibodies

Leishmaniasis -  Leishmania major chromosome 3 contains two gene clusters

Leptin Studies - Ins and outs of leptin receptor activation reviewed

Liver Injury - Prothrombinase generates thrombosis formation in viral hepatitis infections

Longevity - Brain cell research spawns hope for longer life

Malaria - Novel activated C kinase receptor helps regulate plasmodial life cycle

Meningitis - CIE, LA are best tests for pneumococcal antigen detection

Mental Stress - Stress can affect heart rate, NK cell numbers, and subsequent cytokine release

Morphogenesis - Class 3 semaphorins mediate vascular growth through integrin inhibition

Mutagenesis - Deletion in endocytic receptor gene Endo180 impairs collagen uptake

Mutagenesis - Enzyme changes cause different abnormalities in oocytes and bone marrow cells

Mutagenesis - Suppressor mutations define Cbp1 protein regions important for mRNA stability

Neurological Activity - CART peptides can act as psychostimulants and reduce some cocaine effects

Neurology - Early endosomes carry nerve growth factor retrograde signals

Neuroscience - Gli2 required for Shh signaling and oligodendrocyte maturity in spinal cord

Neuroscience - MCK-driven dystrophin ameliorates muscular dystrophy in murine fast muscles

Neuroscience - Phosphorylation of calsenilin at Ser63 regulates its cleavage by caspase-3

Neuroscience - RhoG activates Rac1 by interaction with Dock180-binding protein Elmo

Neuroscience - Serial analysis of gene expression provides insight into nervous system

Neurotransmission - The central portion of Bassoon is involved in synaptic targeting, CAZ anchoring

Obesity Therapy - Exendin-4, a GLP-1 receptor agonist, suppresses food intake in rats

Obesity Therapy - Inverse agonism provides insight into obesity control

Obstetrics - Leptin and hCG modulate new vessel growth at the maternal/fetal interface

Obstetrics - Monoamine transporters are involved in several reproductive processes

Oncogenesis - Collagen XVII expression is reduced, then increased en route to oral cancer

Oncogenesis - Host angiotensin II type 1 receptor signals foster tumor angiogenesis

Oncology - Assay sensitivity sways the results of gene distribution analysis

Oncology - COX-2 causes prostaglandin E2 to modulate pancreatic cancer angiogenesis

Oral Lichen Planus - Infiltrating CD8+ T cells express CCR5, CXCR3 and their chemokine ligands

Ovarian Cancer - Transcriptional and transductional targeting improve gene delivery to ovaries

Pancreatic Cancer - Novel targets for aberrant methylation in pancreatic carcinoma found

Pancreatitis - Mutation in SPINK1 gene linked to idiopathic pancreatitis in Italian patients

Parasitology - Trypanosomes lacking pre-mRNA, gRNA still form functional RNA-editing complexes

Phagocytosis - Bacterial threat must be gauged during recognition, destruction by macrophages

Pregnancy Complications - Placental villotrophoblastic pulmonary emboli can occur following abortion

Pregnancy Tests - Human chorionic gonadotropin is used to test pregnancy but has complications

Prion - Small interfering RNAs inhibit pathological prion protein accumulation

Proteomics -  Egr-1 expression elevated during hyperoxia

Proteomics -  late expression factor-8 gene necessary for optimal baculovirus function

Proteomics - Analysis of E. coli W3110 expressing heterologous sigma factor reported

Proteomics - Annexin I interaction "unmasked" from structure of apo-S100A11

Proteomics - Bax and Bak localize to endoplasmic reticulum to initiate apoptosis

Proteomics - Casein kinase 2 is found in brain cell extracts; it binds occludin

Proteomics - FMRP interacting protein shows intracellular localization

Proteomics - Human protein TIN2 stimulates interactions between telomeric DNA tracts

Proteomics - Increase in NO production by bradykinin mediated by protein kinase A pathway

Proteomics - Oxidative stress induces 1-cys peroxiredoxin expression in lung cells

Proteomics - Phosphinic acid-based MMP-13 inhibitors spare MMP-1 and MMP-3

Proteomics - Proteasome-interacting motif found in ubiquitin-like domain of parkin

Proteomics - Researchers search for new cyclic AMP-binding proteins

Proteomics - Sum1 and Ndt80 proteins compete for binding to sporulation element sequences

Proteomics - The true bioactive conformation of anginex is the beta sheet

Proteomics - Up-regulation of elastin gene expression related to increase in transcription

Psoriasis - Treatment passes Phase II clinical trials

Psoriasis Research - VitD3 downregulates CXCR2, thus inhibiting keratinocyte proliferation

RNA Research - Reverse Hoogsteen base pair 54-58 important for tRNA function

RNA Research - Translational efficiency helps regulate expression of RNA binding protein

Receptor Signaling - Different adapter proteins help create different microbe-specific TLR signals

Receptor Signaling - Toll-like receptor 4 has MyD88-independent pathway for inducing interferons

Receptor Signaling - Toll-like receptor signaling is dependent on adapter proteins such as MyD88

Research Funding - Lipids get the spotlight in new NIGMS "glue grant"

Respiratory Syncytial Virus - Respiratory syncytial virus fusion inhibitor escape mutants characterized

Rheumatology - Propolis has stronger effects against IL-1 beta in cartilage than indomethacin

Schizophrenia Therapy - Mood stabilizers do not affect GSK-3 beta protein levels or GSK-3 activity

Sepsis - NF-kappa B increases occur with organ failure; targeting it may reduce risk

Stem Cell Research - Gene expression profiles predict outcomes following bone marrow transplants

Stem Cell Research - Novel P2Y receptor regulates primitive hematopoietic cell activity

Stem Cell Research - Slug transcription factor needed for SCF/c-kit-mediated stem cell radioresistance

Stem Cell Transplantation - Proteasome activity underlies alloimmune response to HA-3 antigen in stem cell recipients

Stem Cells - Scientists find that stem cells in the bone marrow become liver cells

Streptococcus - Gene linked to Streptococcus pyogenes in asymptomatic carriers

Systemic Lupus Erythematosus - A wide variety of treatments being researched for lupus are more targeted

T Cell Function - CD30 is not only in lymphoma, it is an important regulator of T cell functions

T-Cell Activation - Rho kinase is involved in structural and related activation functions of T cells

T-Cell Epitopes - Proteasomal cleavage sites of proteins for cytotoxic T cells may soon be fully predictable

Targeted Therapy - Complement inhibitor-CR fusion proteins inhibit complement activation better

Thrombogenesis - Beta-2-glycoprotein I is higher in lupus, antiphospholipid syndrome macrophages

Thrombosis - Inhibitors of tissue factor VIIa complex designed as antithrombotic drugs

Toxin Screen - A fluorescent immunoassay can detect enterotoxin B better than ELISA

Transplant Medicine - Absolute lymphocyte count recovery at 30 d associated with CD34+ graft survival

Transplant Medicine - Complement C4d in graft capillaries may mean rejection; it may be controllable

Transplant Medicine - Optimized procedures improve suicide gene therapy in graft-versus-host disease

Tuberculosis Enzymology - Mycobacterial RecA intein acts as DNA-, Mn2+-dependent ATPase

Tumor Suppressor Gene - Identifying Rb function loss may help researchers understand tumor development

Upper Airways - Pain, itch, and perhaps other nociceptive nerve types exist in the upper airway

Ureaplasma -  Ureaplasma multiple banded proteins exhibit phase-shifting mechanism

Urinary Tract Infection - Crystallization, calculus formation depend on type of Proteus endotoxin

Urinary Tract Infection - Toll like receptors and IL-8 receptors are involved in disease pathogenesis

Vaccine Development - Effort to develop vaccines against helminth diseases reviewed

Vascular Medicine - The matrix protein Del-1 initiates angiogenesis in ischemic tissues

Vector Development - Better gene expression can be attained with modified adeno-associated virus

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