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Proteomics Weekly

Susan Hasty, Publisher

Table of Contents . . . November 10th, 2003

Non-Subscriber - Summaries Only

Related Areas: Other Issues in Proteomics Weekly | Other Publications

Parkinson Disease - Parkinson disease mutant degraded through ubiquitin-proteasome system

Pulmonary Medicine - PPAR-gamma inhibits surfactant protein B gene expression in the lung

Anti-Infectives - New antiviral agents from marine-derived fungus reported

Insulin - Rho subfamily of G proteins regulates insulin secretion from beta cells

Neuroscience - Neuroglobin structure shows distinct mode of controlling O2 affinity

Salmonella -  Salmonella SipA polymerizes actin using nonglobular protein arms

AIDS Therapy - Novel gp41 crystal structure licensed from Cornell Research Foundation

Airway Branching - Fgf10 for lung morphogenesis is uniform; distal heparan sulfate activate it

Allergy Medicine - Asthma bronchial provocation tests must be created to best mimic reality

Allergy Medicine - Contact dermatitis from cosmetics can come from many sources including perfumes

Allergy Medicine - Determinants of histamine recognition aid design of antihistamines

Allergy Medicine - Fluorescent labelling can be used to screen for allergens with disulfide bonds

Allergy Medicine - Immediate-type allergic reactions occur due to inflamed tissue hyperreactivity

Allergy Medicine - Treatment of side effects in allergen specific immunotherapy isn't standardized

Alzheimer Disease - Quantitative functional brain mapping assesses progress of Alzheimer disease

Alzheimer Disease - TNF-alpha gene polymorphism protects against Alzheimer disease

Alzheimer Disease - Transferrin gene polymorphisms linked to late-onset Alzheimer disease

Anesthesia - Synaptic PDZ protein interactions disrupted by inhalational anesthetics

Anti-inflammatory Effects - Airway epithelium responds to neutrophil elastase with PGE2 for protection

Anti-inflammatory Effects - Probiotic bacterial homogenates have antiproliferative effects on active PBMC

Antibody Analogue Technology - Protein engineering company reaches technological milestone

Antigen Presentation - Dendritic cells wait at lymph node venules to scan entering T cells for antigen

Antimicrobial Resistance - Mechanism of antibiotic efflux in Gram-negative bacteria reviewed

Antimicrobial Resistance - Multidrug-exporting secondary transporters reviewed

Arthritis Genetics - Two genes involved in arthritis were found in established animal models

Asthma Diagnostics - Sputum eosinophils are the best sputum or blood marker diagnostic for asthma

Asthma Drugs - Montelukast increases phagocytosis, intracellular killing by PML in asthmatics

Autoimmune Disease - Humanized mouse model of inflammatory arthritis may provide insight on tolerance

Autoimmune Disease - LT beta R is essential for proper thymic function and autoimmune control

Autoimmune Disease - T-cell activation can be specifically downregulated by B7x and its receptor

Autoimmune Susceptibility - CARD15 is autoimmune susceptibility gene in Crohn disease, psoriatic arthritis

Bacterial Pathogens -  Shigella IpaC binds to beta-catenin, may be involved in cell-to-cell spread

Bacteriology - Adaptive mutation is common in E. coli

Beryllium Disease - Blood memory T cells are dependent, lung independent of CD28 costimulation

Biosynthesis - New RNase P ribozymes are feasible for use in gene-targeting applications

Biotechnology - Factor XIII improves performance of fibrin sealants

Biotechnology - Impact of biotechnology on future of regulatory toxicology reported

Bipolar Disorder - Dihydropyrimidinase protein gene and bipolar disorder not linked

Brain Tumor - Monocyte chemoattractant protein-1 increases glioma aggressiveness in vivo

Breast Cancer - Competing autocrine pathways regulate breast cancer cell movement

Breast Cancer - Researchers discover how key cancer protein works in inherited forms of disease

Campylobacter - Thermophilic Campylobacter species identified by microarray technique

Campylobacter Jejuni - Transformation in C. jejuni involves several known, several novel genes

Cancer Diagnosis - Scientists test protein as early cancer detection agent

Candidiasis - Assay for diagnosis of disseminated candidiasis developed

Cardiomyopathy - Apoptosis proteins bax and bcl-2, not p53, are increased in cardiomyopathy

Cardiovascular Disease - Apolipoprotein B gene mutations have limited effect on heart disease risk

Cardiovascular Disease - IL-6 superfamily cytokines may play role in heart failure

Cell Biology - Common genetic damages in nondividing cells lead to creation of mutant proteins

Cell Biology - Hypoxia compels macrophages to produce genes linked to pathogenic processes

Cell Biology - Inactivation of beta-catenin causes defective vascular patterns to arise

Cell Biology - Retroviral protein triggers proliferation of immune cells

Central Nervous System - Expression pattern of glypican-1 mRNA after brain injury reported

Cerebral Amyloid Angiopathy - Spontaneous hemorrhage in aging CAA patients may be due to MMP-9

Cholesterol Homeostasis - Hepatic, pancreatic involvement of liver receptor homolog 1 controls cholesterol

Chronic Hepatitis C - Glycyrrhizin uptake may depend on liver organic anion transporting polypeptides

Coagulation - Proteinase-activated receptors can be activated by coagulation proteinases

Colitis - Collagenous colitis with pseudomembrane formation may occur with Ig deficiency

Colitis - High level allograft inflammatory factor-1 reduces IL-1beta, improves colitis

Contractile Diseases - IFN-gamma inhibits myofibroblast formation, may prevent disease progression

Cosmetic Allergy - Sesame oil in cosmetics may cause urticaria in atopic patients or those with skin inflammation

Cytokines - Immunoassay for multiple cytokines is quick and accurate

DNA Repair - Sensors and mediators involved in DNA double-strand breaks defined

DNA Research - DNA condensation by HIV NCp7 has protective role

Dementia - FBD amyloid is made of the abnormal C-terminal fragment of BRI and furin

Demyelinating Disease - Chronic inflammatory demyelinating polyneuropathy may be treatable with IVIg

Demyelinating Polyneuropathy - CIDP with a low response to therapy may have other underlying disease or cancer

Dermatology - Cutaneous manifestations can initiate Waldenstrom macroglobulinemia

Developmental Biology - Effects of ETA signaling on neural crest development clarified

Diabetes Pathogenesis - Secretion coupling by ATP:ADP involved in insulin stimulus

Diagnostics - Native separation and femtomolar detection of zinc proteins developed

Diagnostics - Two mass spectrometry methods comparably measure total homocysteine in serum

Drug Delivery - Drugs may have altered ability to cross blood-brain barrier if there is pain

Drug Development - Novasite wins NIH grants for drugs targeting serotonin receptors

Drug Development - Rational design useful for development of HIV-stimulating agents

Drug Resistance - Novel enzymatic test quickly determines HIV PI resistance

Enzymology - Iodothyronine selenodeiodinases have active site similar to iduronidase

Epidermolysis Bullosa - Lethal epidermolysis bullosa is due to low or lack of integrin beta 4

Erythema Multiforme - Antidesmoplakin autoantibodies enter keratinocytes via plasmalemmal vesicles

Estrogen Deficiency - Estrogen deficiency causes bone loss by T-cell proliferation, lifespan increase

Finance - BeadArray developer reports 176% revenue increase in third quarter

Finance - Proteomics company announces $6 million financing

Foot and Mouth Disease - FMDV RNA polymerase has a hypermutation region, may help in immune evasion

Fungal Infections -  Histoplasma capsulatum is an effective intracellular pathogen

Fungal Infections - How the immune system reacts to fungal pathogens is beginning to be understood

GI Function - Intestinal heat shock protein 110 induces CD1d in epithelial cells

Gene Transfer - BAD overexpression improves the way anchorage-loss encourages apoptosis

Gene Transfer - Human serum albumin-polyethylenimine nanoparticles power transfection ability

Genetics and Genomics - MODY is model of genotype/phenotype interactions in type 2 diabetes

Genetics and Genomics - West African Pygmies have some unique HLA class I alleles and haplotypes

Geriatric Cardiology - Adenosine receptor gene expression heightened in senescent rat heart

Geriatrics - An early event in Alzheimer disease may be activation of caspase-3

Geriatrics - Noggin expression thwarts bone health in aging animal models

Geriatrics - Nuclear estrogen receptor-alpha is not in Alzheimer affected neurons

Guillain-Barre Syndrome - Cases of Guillain-Barre syndrome can have pleocytosis or CSF granulocytes

HIV/AIDS Dementia - HIV and IL-1beta regulate astrocyte FasL expression through the NF-kappa B pathway

HIV/AIDS Pathogenesis - HIV Nef does not affect the efficiency of viral cell fusion

HIV/AIDS Pathogenesis - HIV Vpu prevents apoptosis of infected CD4 cells

HIV/AIDS Pathogenesis - Prognostic CCR5 mutations affect co-receptor expression

HIV/AIDS Pathogenesis - Proteins needed for MVB biogenesis involved in HIV budding

HIV/AIDS Vaccine - Mucosal delivery of HIV-1 Tat protein elicits strong immune response

Hair Growth - Hair follicle dermal papilla cells, follicular keratinocytes express PDGF

Head and Neck Cancer - Stromelysin-3 expression occurs early during human oral tumorigenesis

Heart Attack - NOS1-derived nitric oxide aids post-MI recovery in senescent rats

Heart Disease - Hop overexpression causes severe cardiac dysfunction in mice

Helicobacter Pylori - Dyspepsia symptoms come from high H. pylori prevalence in Kenya

Hematology - Platelet aggregation reduction not mediated by lysine-binding regions

Hematology - Thrombin and platelet activation reviewed

Hemolytic Activity - Atlantic halibut and sea bass serum are capable of hemolyzing blood

Hemophilia A Therapy - Addition of a disulfide bond to factor VIIIa prolongs its life in blood

Henoch-Shonlein Purpura - Immunoglobulin A1 multiple myeloma patients can get Henoch-Schonlein purpura

Immune Modulator - Proteinase-activated receptors have many roles when on immune cells, fibroblasts

Immunogenetic Research - Variations, polymorphism in major histocompatibility complex are being mapped

Infant Formula - Milk product allergenicity is effectively removed by hydrolysis with proteases

Inflammatory Bowel Disease - Signal transducers and activators of transcription play a role in Crohn disease

Inflammatory Response - Researchers discover how nitric oxide prevents blood vessel inflammation

Influenza - Influenza-associated encephalopathy may be linked to cytokine transcription

Informatics - Intrinsic Bioprobes to develop proteomic informatics system through partnership

Information Technology - Differentially expressed genes can be analyzed for with AtlasImage software

Innate Immunity - Toll-like receptors are targets for immunomodulating innate immunity disorders

Interferon - Proinflammatory IFN-gamma also has an array of anti-inflammatory functions

Kidney Disease - Pathophysiology of edema in idiopathic nephrotic syndrome reviewed

Kidney Disease - Role of polycystins in renal tubulogenesis revealed

Malaria - Acidity may determine function of P. falciparum falcilysin

Malaria Gene Therapy - RNA interference disrupts Plasmodium berghei activity in mice

Malaria Pathogenesis - Malaria parasite egress from host erythrocytes clarified

Malignant Melanoma - Laminin, hyaluronan, tenascin-C, collagen are serologic markers for melanoma

Mathematical Modeling - Limiting diversity of antigen presentation appears to enhance immune efficacy

Multiple Sclerosis - MS has multiple loci of modest effect best found by a meta-analytical approach

Muscular Dystrophy - Gene therapy technique shows promise

Mutagenesis - Rapamycin and similar agents might treat tuberous sclerosis complex

Neurodegenerative Disease - NGF-like immunoreactivity increases with nicotine in animal model brain

Neuroscience - Galanin antagonist has agonistic activity in dorsal root ganglion

Neuroscience - Lymphangiogenesis inhibitors may be valuable cancer therapies

Neuroscience - Protein interactions with AMPA and kainate receptors reviewed

Neuroscience - Proteinase-activated receptors act as novel peripheral nerve signals

Oligodendrocyte - Methamphetamine induces oligodendroglial cell death in vitro

Ophthalmology - Vision-producing cells fail "taste-test," treat key light-detecting molecules identically

Osteoporosis - Chicken eggshell matrix proteins encourage calcium transport

Ovarian Cancer - Matrix metalloproteinases influence the formation of cancer-related ascites

Pain Medicine - Pain therapy may soon involve the targeted use of neurotoxic molecules

Placental Enzymes - AMP-deaminase from human placenta appears to be the same as the one from liver

Plasma Registry - French plasma exchange system monitors use, complications, permits studies

Prion Disease - Prion protein in the endoplasmic reticulum disrupts cell viability

Prostate Cancer - Altered cytochrome c oxidase subunit levels found in prostate cancer

Protein Folding - A new molecular culprit found for type 2 diabetes, Alzheimer and Parkinson

Protein Inhibition - Canstatin blocks Akt activation and induces apoptosis in endothelial cells

Protein Regulators - Net is a transcription factor that regulates and activates angiogenic processes

Proteomics - Cryoglobulinemia is a common disorder in those with chronic hepatitis C

Proteomics - Folding and design of repeat proteins discussed

Proteomics - Four-dimensional imaging allows assay of dynamics in live specimens

Proteomics - Homology among telomeric end-protection proteins reported

Proteomics - New cold probe available for proteomics and pharmaceutical research

Proteomics - Poly-arginine-fused calpastatin peptide is specific calpain inhibitor

Proteomics - Potent protein tyrosine phosphatase 1B inhibitors discovered

Proteomics - Presenilin-1 indirectly implicated in Notch1 cleavage

Proteomics - Proteins associated with inactive X chromosome reported

Proteomics - SIN3 deacetylase complex represses mitochondrial protein genes

Proteomics - Screening for specific peptides will divulge tumor dynamics

Proteomics - Structural determinant of PPAR-alpha-activation reported

Pulmonary Embolism - Pulmonary embolism risk linked to FXIIIA and TAFI gene polymorphisms

RNA Research - Group M HIV frameshift efficiencies determined

Receptor Studies - CCR2 antagonist binding site characterized

Receptor Studies - Excitotoxic spinal cord lesions induce NR1 expression

Recombinant Research - Protein produced in E. coli has antiapoptotic effect

Rheumatoid Arthritis - Intramuscular gold therapy can cause reversible acute thrombocytopenia, too

Rheumatoid Arthritis - Phase II clinical trial with MLN1202 begins in RA patients

SARS - Serologic response to severe acute respiratory syndrome virus may be delayed

Schistosomiasis - Chemokine responsiveness altered in mice infected with Schistosoma

Sepsis - Mortality linked to inter-alpha inhibitors in patients with sepsis

Septicemia - Septicemic lymphopenia is due to Th1 cell apoptosis, creating a shift to Th2

Serine Protease Inhibitors - Nafamostat mesilate can suppress upregulated NF-kappa B and nitric oxide

Serum Proteins - Secreted CD155 can have a liver origin, may be involved in antiviral defense

Smallpox - Orthopoxviruses detected using microarrays of immobilized oligonucleotides

Stem Cells - Embryonic pathway critical to growth of digestive tract tumors

Stem-Cell Research - Advantages of 3D stem-cell coculture system clarified

Stem-Cell Research - Monoclonal antibodies useful for mapping receptor expression by hematopoietic cells

Stem-Cell Research - Myostatin sustains satellite cell quiescence

Stem-Cell Research - Transduced progenitor cells give rise to ones that express recombinant protein

Stem-Cell Research - Transfection of neurotrophic factor augments GSC expansion

Stem-Cell Transplantation - Cord blood CD34+ and CD133+ cells can be efficiently expanded in vitro

Streptococcal Risk - Parkinson disease symptoms may occur following streptococcal pharyngitis

Streptococcal Vaccine - Group A streptococcal C5a peptidase is effective vaccine antigen

Streptococcus - Mouse monoclonal antibodies for pneumolysin characterized

Surfactant Protein A - Lung SP-A aids alveolar macrophage phagocytosis, but lowers inflammation

Testicular Cytokine - Granulocyte-macrophage colony stimulating factor affects sperm motility

Therapeutic Potential - Heat shock protein 70 can provide peptides to antigen presenting cells

Toxoplasma - Cis/trans factors involved in apicoplast targeting in Toxoplasma gondii

Transfusion Medicine - Refrigerating transfusion blood induces apoptosis, may cause immunosuppression

Transgenics - Mice bred to express fusion proteins facilitate vascular analysis

Transplant Medicine - Soon immunosuppression will be replaced or reduced by use of tolerance induction

Treatment Risks - Chemotherapy may bring on complications relating to infection and bleeding

Trimethoprim Resistance - Dihydrofolate reductase genes can be detected easily by PCR and RFLP

Tuberculosis Immunology - TNF-alpha helps contain infection in pleural TB patients

Type 2 Diabetes Therapy - Glycogen synthase kinase-3 inhibitors can treat type 2 diabetes

Umbilical Cord Blood - Cord blood mast cells release I-309 after IgE exposure

Vaccine Development - Human T-cells recognize N-terminally Fmoc-modified peptide

Vaccine Development - Simultaneous measurement of pneumococcal polysaccharide antibodies reported

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