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Proteomics Weekly

Susan Hasty, Publisher

Table of Contents . . . December 20th, 2004

Non-Subscriber - Summaries Only

Related Areas: Other Issues in Proteomics Weekly | Other Publications

Atherosclerosis - Lipoprotein induction of chemotactic protein-3 in atherosclerosis

Epilepsy - Overexpressed neuropeptide Y may protect against hyperexcitability

Infection - HCMV induces rapamycin-insensitive phosphorylation of mTOR kinase effectors

Osteoarthritis - Collagen synthesis, regulatory molecule expression studied in osteoarthritis

Pediatrics - A protein in breast milk helps prevent and treat deadly neonatal enterocolitis

Physiology - Integrin-mediated cellular functions selectively inactivated

AIDS/HIV Pathogenesis - DC-SIGN interference inhibits HIV transmission from dendritic to T cells

Alcohol Abuse - Ferulic acid influences prooxidant antioxidant status

Allergy Medicine -  Stellaria dichotoma beta-carboline-type alkaloids are antiallergic

Allergy Medicine - Chimeric protein microarray useful for structural epitope screening

Alzheimer Disease - Beta-amyloid (1-42)-induced learning and memory deficits in mice

Alzheimer Disease - Findings show how toxic proteins rob AD patients of memory

Alzheimer Disease - Increased endocytotic pathway-mediated A beta 42 secretion in apoptosis

Amyotrophic Lateral Sclerosis - ALS2CL binds to Rab5 and modulates endosome dynamics

Amyotrophic Lateral Sclerosis - Effect of p75 neurotrophin receptor antagonist on ALS reported in murine model

Amyotrophic Lateral Sclerosis - Promising results seen in the battle against incurable muscle disease

Anti-Infectives - Yeast killer toxin-like antibodies possess therapeutic potential

Antipsychotic Treatment - Clozapine enhances chronic PCP-induced regulation of prefrontal cortex receptors

Apoptosis - Activated NK/CD8+ cells express TRAIL and TRAIL receptors

Apoptosis - Apoptosis-inducing factor orthologue regulates apoptosis in yeast

Apoptosis - DNA-dependent protein kinase can phosphorylate Ser46 of human p53

Apoptosis - Infrared radiation affects apoptosis mitochondrial pathway in human fibroblasts

Apoptosis - Raf/MEK/ERK pathway block sensitizes AML cells to lovastatin-induced apoptosis

Atherosclerosis - Endothelial phenotype of susceptible and resistant vasculature characterized

Atherosclerosis - Lercanidipine may inhibit macrophage functions involved in plaque stability

Biotechnology - Aspartic to serine proteinase redesigned in catalytic center of porcine pepsin

Breast Cancer - Autocrine Epo signaling inhibits hypoxia-induced apoptosis in cancer cells

Breast Cancer - Novel protein pathway linked to aggressive progression of breast cancer

Business & Finance - DNA identity services provider affirms quality assurance procedures

Business Update - Biosample-management company announces global expansion

Business Update - Partnership to combine information technology with biotech research formed

CNS Synapses - Lasp-1 is a component of synapses and dendritic spines

Caenorhabditis Elegans - TetraThymosin beta and actin dynamics in C. elegans studied

Cancer Therapy - Coramsine proven effective in treating mesothelioma in a mouse model

Cancer Vaccine - Novel pro-apoptotic peptide impairs phosphorylation by protein kinase 2

Carcinogenesis - Innovative technology leads to new insights on carcinogenesis

Cardiology - MaxiK channel beta 1 subunit decreases with coronary artery ageing

Cardiology - Prazosin requires endothelial NOS to generate skeletal muscle angiogenesis

Cardiology - The antifibrosis peptide Ac-SDKP may prevent and treat cardiac disorders

Cardioprotection - A PKC-tyrosine kinase module may be involved in pharmacological cardioprotection

Cardiovascular Disease - Urokinase product ThromboClear entering manufacturing stage

Cardiovascular Research - Approach provides new venues for inquiry into ANG II-mediated cardiac function

Cardiovascular Research - Study sought to identify ERRalpha-regulated pathways in heart tissues

Cell Biology - Dynein/dynactin complex regulates mitochondrial morphology

Cell Biology - Kinectin function elucidated

Cell Biology - Lis-1 needed for dynein-dependent cell division in C. elegans embryos

Cell Biology - Novel centrosomal proteins identified

Cell Biology - Organized, intranuclear filament network in living mammalian cells visualized

Cell Signaling - Researchers honored for work on signal transduction in cells

Cell-Cycle Analysis - Company launches Cell Cycle assay

Channel Opening - Cation channels opened by muscarinic stimulation with carbachol

Cholera - Association of cytoskeleton with cholera toxin-ganglioside complex

Chronic Obstructive Pulmonary Disease - Genes linked to COPD pathogenesis identified

Collaborations - Companies to offer pharmacogenomic technologies for oncology drug development

Collaborations - Genes-to-leads drug discovery deal signed

Colon Cancer - Antibody developed that penetrates mutant p53 colon cancer cells and binds p53

Colorectal Cancer - CDX2 useful as marker for colorectal adenocarcinoma

Congestive Heart Failure - Scientists use gene therapy to rescue failing hearts in animals

Cystic Fibrosis - Genomic effects of Pseudomonas on CF cells determined

Cytomegalovirus - Inhibition of human cytomegalovirus replication involves three mechanisms

DNA Research - DNA identity labs awarded $1.9 million for National Missing Persons Initiatives

DNA Research - Novel DNA hybridization assays using temperature gradient focusing developed

Depression - Differential effects of agomelatine versus fluoxetine in the rat brain

Diabetes Complications - Hypoglycemic effects of bioflavonoids mediated by hepatic enzymes

Diabetes Complications - Thyroiditis in diabetic mice lacking IFN regulatory factor examined

Diabetes Genomics and Genetics - Missense mutations in glucagon-like peptide 1 receptor gene found

Diabetes Pathogenesis - Calcitonin gene-related sensory neurons lost in early diabetes

Diabetes Pathogenesis - Dendritic cells lead to type 1 diabetes in CD154-expressing mice

Diabetes Pathogenesis - Expression profiling of insulin action in human myotubes reviewed

Diabetes Pathogenesis - Fatty acids and cytokines kill beta-cells by different mechanisms

Diabetes Pathogenesis - Glucose intolerance develops in mice overexpressing glycogen kinase

Diabetes Pathogenesis - IGF-I decline in induction of atrogin-1/MAFbx in diabetes studied

Diabetes Pathogenesis - Microarray analysis of IgG autoantibodies predicts diabetes in mice

Diabetic Endocardiopathy - Cardiac mitochondrial damage and biogenesis in type 1 diabetes studied

Diabetic Nephropathy - Advanced glycation end-products involved in organic cation transport

Diagnostics - Patent issued for optical waveguides and molecular diagnostics device

Disease Associations - Pulmonary EC-SOD is redistributed after asbestos exposure

Drug Delivery - Peripheral tissues express transgenes after oral polyplex-based DNA vaccination

Drug Development - In silico tool predicts cytochrome P450 2D6 inhibition

Drug Development - Novel stilbenoid has potent anti-tumor activity

Drug Metabolism - Cytochrome P450 3A4 plays leading role in aprepitant metabolism

Drug Metabolism - Metabolism of cyclosporine A by kidney CYP3A5 characterized

Drug Metabolism - Miniature on-line screening system for UGT inhibitors developed

Duchenne Muscular Dystrophy - Progression of kyphosis in a mouse model of muscular dystrophy documented

E. coli - Protein keeps pathogenic bug from infecting skin

Electrophoresis - Novel microchip system facilitates quantitative protein analysis

Endocrinology - Frog metamorphosis characterizes the molecular dynamics of thyroid hormone

Endocrinology - Luteinizing hormone receptor in Leydig cell hypoplasia

Endocrinology - Transcriptional response to CRF characterized in mouse pituitary cells

Endocriology - Parathyroid hormone gene variants do not spawn idiopathic hypoparathyroidism

Endometriosis - Dysregulation of IL-1/IL-1-R system may relate to immunologic dysfunction

Enzymology - Binding of theophylline and adenosine deaminase characterized

Enzymology - Losses of enzymatic activities in rat brain and liver mitochondria

Enzymology - NADPH oxidase could be targeted for the treatment of cancer or heart disease

Enzymology - Peptidoglycan amidase MepA is a LAS metallopeptidase

Enzymology - Researchers propose series of reactions involved in conversion of DNA to CO-DNA

Enzymology - Sleeping Beauty transposase can be altered to improve genetic research

Female Diabetes - PPAR-gamma activation affects nitric oxide production in placenta

Foamy Virus - Feline foamy virus Tas protein is a DNA-binding transactivator

Gastroenterology - Protein kinase B/Akt isoforms affect epithelial cell survival and anoikis

Gastroenterology - Sildenafil influences gastric sensorimotor function in humans

Gastrointestinal Research - Signaling studied in smooth muscle mediated by ETA and ETB

Gene Analysis - Targeted DNA photocleavage detects single-nucleotide polymorphisms

Gene Expression - GenUs BioSystems to provide outsourced gene-expression profiling services

Gene Promoters - G-quadruplex ligands may stop c-myc activity in tumor cells

Gene Transfer - Central leptin gene therapy shows promise for diminishing obesity

Gene Transfer - Copper/zinc superoxide dismutase enhances VEGF synthesis

Genetic Disorders - A novel RAB7 mutation associated with ulcero-mutilating neuropathy

Genetic Mutations - Cytochrome c oxidase biogenesis in a patient with a COX10 mutation

Genomics - CLBP and cardiotoxin genes diverged before appearance of numerous cardiotoxins

Genomics and Genetics - Calcium-mediated response to alkaline stress characterized in S. cerevisiae

Glaucoma - Age-related changes seen in trabecular meshwork cells

Growth & Differentiation - Osteoblast stage determines stretch-induced phosphorylation of ERK1/2

Growth Hormones - Continued growth hormone treatment after final height needed

Gynecology - Ether a go-go is a biomarker for human cervical cancer

HIV/AIDS - Proof-of-principle results for HIV drug candidate released

HIV/AIDS Research - HIV-1 virus-like particles lacking nucleocapsid domain fail to package APOBEC3G

HIV/AIDS Research - Selected AA substitutions in C-terminal region of HIV-1 CA affect virus assembly

Heart Failure - Data may explain salutary effect of adenylyl cyclase type VI in failing hearts

Helicobacter Vaccine - Glycoconjugates with NeuAc-NeuAc-GaL-Glc prevent H. pylori adhesion

Hematology - Imaging details, pathological differences of red blood cells seen in lupus

Hematology - Structure of erythrocyte NADH-cytochrome b5 reductase determined

Hepatic Innervation - Scientist investigate the role of innervation in sinusoidal diameter regulation

Herpetic Stromal Keratitis - Interleukin-1 receptor antagonist counteracts HSV-related corneal inflammation

Hormone Deficiency - Adults with PROP-1 gene mutations grow upon receiving hormone therapy

Hormones - Estrogen accelerates occludin modulation at tight junctions

Hormones - Thyroid hormones regulate DNA-synthesis and cell-cycle proteins

Human Papillomavirus Vaccine - Papillomavirus-like particles stimulate dendritic cells to produce IFN-alpha

Huntington Disease - Fine retina structure and connexin expression in Huntington disease detailed

Huntington Disease - Group blocks formation of toxic protein clumps seen in HD

Hypercalciuria - Monocyte vitamin D receptors elevated in idiopathic hypercalciuria

Hypertension - Lentiviral vectors bear clones that offer long-term ACE2 secretion

Imaging - 3-D imaging of Toxoplasma gondii, host-cell interactions reported

Immunology - Enhanced expression of cell cycle regulatory genes found in CD8+ T cells

Immunology - Functional properties of CD27+ memory T cells determined

Immunology - Gene expression of IL-10-induced myeloid DC characterized

Immunology - Novel CS1 splice variant identified in natural killer cells

Immunology - Regulated production of chemokine CCL28 in colon epithelium described

Immunology - Roles of prostaglandin receptors are determined by multiple factors

Immunology - TLR-induced macrophage transcriptional activation characterized

Infection -  Plasmodium falciparum-infected erythrocytes bind to fibronectin

Infection - Molecular partitioning during host cell penetration by Toxoplasma gondii

Infections - Nitric oxide production kinetics following endotoxin challenge

Insulin Release - Artifactual insulin release from embryonic stem cells reported

Insulin Resistance - Insulin interacts with lipid metabolism in CEACAM1-inactive mice

Interferon - Interleukin-4-induced eotaxin-3 production enhanced in airway epithelium

Ischemic Stroke - Strokes are more severe in VEGF-deficient mice

Islet Transplantation - Proinsulin secretion linked to graft function after islet transplant

Leishmaniasis Vaccine -  Leishmania antigen and ODN protect against L. donovani infection

Leukemia - Interleukin-3 receptor is a target for antileukemic drugs

Leukemia - PAX5 is specific marker of B-cell ALL

Lipid Research - Effects of atorvastatin on fasting plasma, marginated apolipoproteins reported

Liposomal Delivery - Ovarian cancer cells internalize TAT-peptide modified liposomes by endocytosis

Liver Cancer - Prognostic value of survivin in hepatocellular carcinoma determined

Liver Injury - Leptin resistance may leave humans susceptible to alcoholic steatohepatitis

Lymphoma - Simian virus 40 not involved in lymphoma pathogenesis

Medical Education - Cancer center starts new graduate school

Medical Technology - Life science research tools maker signs distribution agreement with Belgium firm

Melioidosis - Two-partner secretion system identified in Burkholderia pseudomallei

Memory Research - Hippocampal CA3-region is crucial for memory consolidation

Meningococcal Vaccine - P64k meningococcal protein elicited cell-mediated immune response in mice

Mental Health - Regular voluntary exercise reduces anxiety and impulsiveness

Muscular Dystrophy - Muscle biopsy used in the analysis of the dystrophin gene

Mutagenesis - The homologous recombination pathway propels gene repair activity

Mutation - Mutation in babies identified by mass spectrometry is temperature sensitive

Mycobacteria - Proteomic profiling of intact mycobacteria by MS conducted

Neisseria Vaccine - Functional genomics applied to Neisseria meningitides vaccine development

Netherton Syndrome - Corneodesmosin detachment, desmosomal dissociation, and destabilization reported

Neural Crest - Genes implicated in placode formation discovered

Neurodegeneration - DNA damage caused by altered uracil incorporation produces neuron apoptosis

Neurology - Cholecystokinin improves cognition in dopamine-deficient young rats

Neurology - Differential distribution of channel proteins in adult mouse brain demonstrated

Neurology - Early blood-brain barrier disruption in human focal brain ischemia

Neurology - Hippocampal and entorhinal cortical plasticity in spatial memory

Neurology - Neuronal LRP1 is required for normal motor function in mice

Neurology - Neuropathic pain-related disorders suppressed by diet in rat model

Neurology - SOX and POU factors interplay in Nestin gene regulation

Neuroscience - Dystrophin expression mapped in rat brain

Neuroscience - Enzyme knockdown in mice increases collagenase-related cerebral hemorrhage

Neuroscience - Glycosphingolipid makeup of brain microvascular endothelial cells determined

Neuroscience - Human HCN1 channel and its inhibition by capsazepine characterized

Neuroscience - MARK/PAR1 kinase regulates microtubule-dependent transport in axons

Neuroscience - Novel pyridine derivatives show promise for dopamine D4 receptor imaging

Nutrition - Blood lead concentration, dietary intakes studied in 3-12 month infants

Nutrition - Dietary induction and inhibition of cytochrome P450s protein

Nutrition - Dietary potassium intake regulates the response to adenosine

Nutrition - Undernutrition alters respiratory mechanics and lung parenchyma

Obesity - Pharma company acquires patent rights to Peptide YY for obesity

Obesity Pathogenesis - Committed preadipocytes in adipose tissue from obese patients measured

Obesity Pathogenesis - Inulin-type fructans modulate gastrointestinal peptides involved in appetite

Obesity Pathogenesis - Levels of TNF-alpha and nitric oxide increased in obese women

Obesity and Diabetes - IL-6 greater in preadipocytes than adipocytes of 3T3-L1 cells

Obesity and Diabetes - Impaired fibrinolysis in obesity examined

Obesity and Diabetes - Leptin effects on insulin secretion in isolated pancreatic islets studied

Oncogenesis - Hepatitis C protein interaction with Smad3 counteracts cancer inhibition

Oncology - COP1 is overexpressed in breast and ovarian adenocarcinomas

Oncology - Calpain cleavage of beta-catenin linked to prostate and mammary tumorigenesis

Oncology - Inhibitors that staunch gp130 signals may treat breast cancer

Oncology - Novel 99mTc-labeled GnRH analog shows promise as imaging agent

Oncology - VEGF signals can be blocked to fight small cell lung cancer growth

Oncology - Vasohibin is a negative regulator of tumor angiogenesis

Osteoporosis - Osteoclasto- and osteoblastogenesis transiently increase during early bone loss

Ovarian Cancer - DNA microarray expression profiling predicts chemotherapeutic response

Ovarian Cancer - Xenograft response to cisplatin can occur regardless of p53 status

Pain Research - Peripheral and central p38 MAPK mediates capsaicin-induced hyperalgesia

Parkinson Disease - Two-fisted assault on dopamine transport system may be foundation of PD

Parkinson Disease Therapy - Flavin-containing monooxygenase mediates selegiline N-oxidation

Patents - U.S. patent issued for stabilized bioactive peptides

Peripheral Vascular Disease - Protein tyrosine phosphatase inhibitor hastens angiogenesis in ischemic limbs

Personnel - Genomic analysis solutions names acting chief executive officer

Physical Activity - Exercise increases glycogen synthase activity in type 2 diabetes

Physiolog - Hepatoproliferin in rat hepatocytes purified, prevalence determined

Physiology -  Drosophila PP1 beta regulates nonmuscle myosin

Physiology - CYP3A5 polymorphism, ethnic differences in cyclosporine pharmacokinetics studied

Physiology - Fibrin stimulates platelets to increase factor VIIIa binding site expression

Physiology - Functionally critical residues of the type I human interferon receptor

Physiology - Growth in human fibroblasts repressed by ionizing radiation

Physiology - Histone phosphorylation, oncotic cell death clarified in renal epithelial cells

Physiology - Interaction seen between the enamel matrix proteins amelogenin and ameloblastin

Physiology - Liver C-JUN N-terminal kinase activated by tissue hypoxia in hemorrhagic shock

Physiology - Mitogenesis is mediated by TRPC4 expression and activity

Physiology - Regulation of kidney vasodilation and aspartate receptor expression

Physiology - The novel G beta-like protein WDR26 suppresses MAPK signaling pathway

Prions - Cre-loxP mediated control of PrP

Prions - Microbial hydrolysis of amyloid prion protein, meat and bone meal reported

Prions - Poly(L-proline) helix demonstrated in the N-terminal region of a prion protein

Prostate Cancer - JAGGED1 expression is associated with prostate cancer metastasis, recurrence

Prostate Cancer - MER/N-CAM-related kinase may play role in tumor progression

Prostate Cancer - Phosphorylated Akt-1 predicts biochemical recurrence

Protein Detection - Aptamer-based exonuclease protection assay offers sensitive protein analysis

Protein Precursor - Reexpression of vimentin enhances elongation of axonal neurites

Protein Regulation - Sphingosine 1-phosphate-related N-cadherin activation stabilizes blood vessels

Protein Signal - Mediation of mucin secretion from human bronchial epithelial cells reported

Protein Signal - PGE2 inhibits chondrocyte differentiation through PKA and PKC signaling

Protein Signal - Regulation of nuclear localization and protein degradation of Rac1 studied

Protein Signal - Vascular endothelial-cadherin is a functional regulator of VEGF receptor 2

Proteomics - Gene profiles show the small molecule purmorphamine augments hedgehog signals

Proteomics - Impact of slide aging on immunohistochemical translational studies determined

Proteomics - In-solution digestion improves mass spectometry lipid raft detection

Proteomics - Key elements rule the effect of La protein on hepatitis B virus stability

Proteomics - Novel LC-MALDI-MS analysis method developed

Proteomics - PAL-E-reactive vimentin exhibits unique functions in the blood vasculature

Proteomics - Pharma company announces results of study with human lactoferrin

Proteomics - Retrieval does not induce reconsolidation of inhibitory avoidance memory

Proteomics - TRPC5 activation kinetics moduclated by scaffolding protein

Proteomics - Triple-helical ligands offer a way to monitor proteolysis regulation

Psychology - Influence of hippocampectomy on behavior and spatial memory in rats

Psychology - Role of amygdala and acetylcholine in drug-induced conditioned reward shown

Pulmonary Research - Pentoxifylline reduces fibrin deposition in neonatal hyperoxic lung injury

Receptor Studies - Olfactory receptor genes show genomic location and spatial expression linkage

Reconstructive Surgery - Low VEGF levels in ischemic flaps warrant the use of exogenous protein

Regulatory Issues - FDA proposes draft guidance for new plant varieties intended for food use

Reproduction Research - Ubiquitin-like modifier required in Caenorhabditis elegans

Reproductive Biology - Uterine secretion of ISP proteins regulated by progesterone and estrogen

Reproductive and Sexual Health - European patent granted for sexual dysfunction medication

Respiratory Research - Mechanisms of serum potentiation of GM-CSF production clarified

Respiratory Research - Role of heat shock factor 1 in inhibition of NF-kappa B pathway studied

Respiratory Research - Study reports temporal effects of organic dust in the lung

Rheumatology - Wnt gene signals show redundancy in modulating synovial joint formation

Scleroderma - Scleroderma fibroblasts overexpress plasminogen activator inhibitor type 2

Sclerosing Cholangitis - Disoriented T cells cause liver disease

Sickle Cell Disease - Sickling impairs microvascular function in murine model

Skeletal Development - Long-term in vitro limb cartilage development analyzed

Sleep Apnea - Relation between cytokine with obesity and sleep apnea investigated

Smoking - Insulin-like growth factors decreased in men who smoke cigarettes

Spermatogenesis - Disruptive effect of ryanodine receptors in mouse spermatogenic cells reported

Spinal Muscular Atrophy - Pain reliever may help treat life-threatening childhood disease

Staphylococcus Aureus -  S. aureus peptidoglycan increases matrix metalloproteinase

Stem-Cell Research - Differentiation potential of human fetal neuronal progenitor cells clarified

Taste Receptor - Different functional roles of T1R subunits in the heterorneric taste receptors

Technology - UNC gets $1 million for genome fingerprint scanning program

Tissue Engineering - Osteoblast adhesion to common biomaterials regulated through integrin binding

Tobacco Use - Cigarette smoke-induced 5-lipoxygenase generates colonic adenomas

Transplant Medicine - Liver transplantation and changes in tacrolimus distribution studied

Trypanosoma Cruzi -  T. cruzi TcRho1 has a role in metacyclogenesis, cellular localization

UV Radiation - Lack of in vitro protection by a common sunscreen ingredient reported

Vaccinia Virus -  Bacillus alcalophilus peptidoglycan inhibits vaccinia virus replication

Ventricular - Migratory behavior of cortical ventricular early-, late-born neurons documented

Viral Proteomics - Disruption of the hepatitis C virus NS4B amphipathic helix shutters replication

Virology - Avian reovirus mutant has major core protein lesion and is defective in assembly

Virology - New data supports the utility of telomerase activation for HIV/AIDS therapy

Virology - TRPC1 overexpression enhances of pulmonary vasoconstriction

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